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| Packages | |
| org.genepattern.client | Provides facilities for running GenePattern modules. |
| org.genepattern.data.expr | Provides facilities for the representation of expression data. |
| org.genepattern.data.matrix | Provides matrix facilites. |
| org.genepattern.data.pipeline | |
| org.genepattern.io | Provides facilities for reading and writing data files. |
| org.genepattern.io.expr | Provides facilities for reading and writing expression data files. |
| org.genepattern.io.expr.cls | Provides facilities for reading and writing cls files. |
| org.genepattern.io.expr.gct | Provides facilities for reading and writing gct files. |
| org.genepattern.io.expr.mage | Provides facilities for writing MAGE-ML files. |
| org.genepattern.io.expr.odf | Provides facilities for reading and writing odf files. |
| org.genepattern.io.expr.res | Provides facilities for reading and writing res files. |
| org.genepattern.io.expr.stanford | |
| org.genepattern.util | |
| org.genepattern.webservice | |
| org.genepattern.webservice.jaxb.job | |
| org.genepattern.webservice.jaxb.parameter | |
| org.genepattern.webservice.jaxb.task | |
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