org.genepattern.util
Class LSIDUtil

java.lang.Object
  org.genepattern.util.LSIDUtil

All Implemented Interfaces:

IGPConstants

public class LSIDUtil

extends java.lang.Object

implements IGPConstants

Field Summary

static java.lang.String	AUTHORITY_BROAD
static java.lang.String	AUTHORITY_FOREIGN
static java.lang.String	AUTHORITY_MINE
static java.lang.String	BROAD_AUTHORITY

Fields inherited from interface org.genepattern.util.IGPConstants

ACCESS_PRIVATE, ACCESS_PUBLIC, ANT, ANY, AUTHOR, COMMAND_LINE, COMMAND_PREFIX, CPU_TYPE, DEFAULT_PATCH_REPOSITORY_URL, DEFAULT_PATCH_URL, DESCRIPTION, DOMAIN, FILE_FORMAT, FORMER_NAME, INPUT_BASENAME, INPUT_EXTENSION, INPUT_FILE, INPUT_PATH, INSTALLED_PATCH_LSIDS, INVOKE, JAVA, JOB_ID, JVM_LEVEL, LANGUAGE, LEFT_DELIMITER, LIBDIR, LSID, LSID_PROVENANCE, MANIFEST_FILENAME, MAX_PARAMETERS, MULTIPLE, NAME, ODF, OS, PARAM_INFO_ATTRIBUTES, PARAM_INFO_CHECKBOX, PARAM_INFO_CHOICE, PARAM_INFO_CHOICE_DELIMITER, PARAM_INFO_CHOICE_TYPES_MULTIPLE_OFFSET, PARAM_INFO_CHOICE_TYPES_OFFSET, PARAM_INFO_CLIENT_FILENAME, PARAM_INFO_DEFAULT_VALUE, PARAM_INFO_DOMAIN, PARAM_INFO_FILE_FORMAT, PARAM_INFO_NAME_OFFSET, PARAM_INFO_OPTIONAL, PARAM_INFO_PREFIX, PARAM_INFO_SPACER, PARAM_INFO_STRING, PARAM_INFO_TYPE, PARAM_INFO_TYPE_CLASS_OFFSET, PARAM_INFO_TYPE_FLOAT, PARAM_INFO_TYPE_INPUT_FILE, PARAM_INFO_TYPE_INTEGER, PARAM_INFO_TYPE_NAME_OFFSET, PARAM_INFO_TYPE_OFFSET, PARAM_INFO_TYPE_SEPARATOR, PARAM_INFO_TYPE_TEXT, PARAM_INFO_TYPES, PATCH_ERROR_EXIT_VALUE, PATCH_SUCCESS_EXIT_VALUE, PERL, PIPELINE_SCRIPT, PREFIX, PRIVACY, PRIVACY_LEVELS, PRIVATE, PUBLIC, QUALITY, QUALITY_DEVELOPMENT, QUALITY_LEVELS, QUALITY_PREPRODUCTION, QUALITY_PRODUCTION, R, R_HOME, REQUIRED_PATCH_LSIDS, REQUIRED_PATCH_URLS, RESERVED_PARAMETER_NAMES, RIGHT_DELIMITER, SERIALIZED_MODEL, STDERR, STDOUT, SUITE_MANIFEST_FILENAME, SUITE_NAMESPACE, TASK_ID, TASK_INFO_ATTRIBUTES, TASK_NAMESPACE, TASK_TYPE, TASK_TYPE_PIPELINE, TASK_TYPE_VISUALIZER, TASKLOG, TOMCAT, UNREQUIRED_PARAMETER_NAMES, USER_LOGGED_OFF, USERID, UTF8, VERSION

Method Summary

int	compareAuthorities(LSID lsid1, LSID lsid2)
java.lang.String	getAuthority()
java.lang.String	getAuthorityType(LSID lsid)
static LSIDUtil	getInstance()
LSID	getNearerLSID(LSID lsid1, LSID lsid2)
java.lang.String	getSuiteNamespace()
java.lang.String	getTaskNamespace()
static boolean	isSuiteLSID(LSID lsid)
static boolean	isSuiteLSID(java.lang.String lsid)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

AUTHORITY_MINE

public static java.lang.String AUTHORITY_MINE

AUTHORITY_BROAD

public static java.lang.String AUTHORITY_BROAD

AUTHORITY_FOREIGN

public static java.lang.String AUTHORITY_FOREIGN

BROAD_AUTHORITY

public static java.lang.String BROAD_AUTHORITY

Method Detail

getInstance

public static LSIDUtil getInstance()

getAuthority

public java.lang.String getAuthority()

getTaskNamespace

public java.lang.String getTaskNamespace()

getSuiteNamespace

public java.lang.String getSuiteNamespace()

getAuthorityType

public java.lang.String getAuthorityType(LSID lsid)

compareAuthorities

public int compareAuthorities(LSID lsid1,
                              LSID lsid2)

getNearerLSID

public LSID getNearerLSID(LSID lsid1,
                          LSID lsid2)

isSuiteLSID

public static boolean isSuiteLSID(java.lang.String lsid)

isSuiteLSID

public static boolean isSuiteLSID(LSID lsid)